Category Archives: Writing research reports

When to cite and when not to

What information should be cited? Where do I place the citation in a sentence? These two questions are commonly asked during my writing workshops and online courses. Other problems I regularly see are too many citations to support a piece of information or statements of fact that should be supported by a citation. This blogpost reviews the basic concepts of citation and discusses the importance of always citing your sources.

What is a citation?

Authors of scientific documents use citation to indicate when information comes from another source: who wrote (or produced) the information being discussed and when it was published.

The standard method of citation is to insert in-text citations directly before, or after, the information that is attributed to another source or author. These citations are then listed at the end of the document, within either a bibliography or reference list. A reference list includes only the references that are cited, whereas a bibliography is both a list of the references cited and additional references used when researching and writing the document.

There are many different referencing styles, including the APA style which is commonly used in science publications. The Author – Date in-text citation is where the authors surnames and dates of publication are written within brackets at the end of a sentence or phrase. For example. “Aquatic air breathers periodically break the water surface to gulp air but never leave water (Gonzales et al. 2006).” (Magellan 2016, p 452)

If there is more than one citation for a particular statement, the citations are separated by semicolons. For example: “The conflicting requirements for aquatic and terrestrial life are perhaps most pronounced in air-breathing fishes (Sayer & Davenport 1991; Graham 1997; Sayer 2005).” (Magellan 2016, p 452). This example also demonstrates the convention of ordering citations from earliest year published (1991) to latest year published (2005). If two publications were cited from the same year, then the order of citation would be in alphabetical order of the first author (Sinclair & Ryan 2019; Smith 2019).


Where should in-text citation be placed?

I am often asked whether to place the citation at the end of the sentence, in brackets, or at the beginning where it forms part of the sentence.

Often the citation is made after a statement of fact. If there are three statements within a sentence, there will be three separate citations lists within that sentence; An example from Magellan (2016, p 452), “Amphibious animals are adapted for both aquatic and terrestrial habitats and divide their lives periodically (e.g. Yeomans 1995; Dall’Antonia & Sinsch 2001) or ontogenetically (e.g. Martin et al. 2004; Blob et al. 2007) between water and land (Sayer & Davenport 1991; Sayer 2005).”

Alternatively, the authors of a publication can appear in the beginning of a sentence when they are is used as the subject of the sentence, while the date of publication is written in brackets. In this case, the previous citation example of Gonzales et al. 2006 by Magellan 2016 could be rewritten as ‘Gonzales et al. (2006) found that aquatic air breathers periodically break the water surface to gulp air but never leave water’. However, this type of citation increases the length of the sentence as the verb phrase ‘found that’ needs to be added.

As a general guide, if you use the findings of a study to develop your reasoning, it is easiest and more concise to place the citation at the end of the sentence. That way you can easily list more than one study as a list of citations in brackets, as in the example above. However, if you are discussing a particular study over more than one sentence, it is easier for the reader if you first introduce the authors as the subject of the sentence.
Irrespective of where the citation is placed, hyperlinking can used with electronic publications to link a quote or citation directly to the document being cited, as with the Fensham et. al (2017) paper cited below.

Ideas, quotes and paraphrasing should be cited

You must include a citation if you quote, paraphrase or summarise someone else’s information or ideas. Quoting is writing the exact words used by another author and enclosing the text in double quotation marks; for example: Fensham et. al (2017) concluded that “The findings of the current study support the importance of rainfall variability as the major influence on the demography of E. melanophloia, the dominant tree in a semi-arid savanna” (p. 780). The page number where the quotation appeared should always be included.

Paraphrasing is rewriting someone else’s writing using your own choice of words; for example, I would both summarise and paraphrase this previous quote as, ‘Fensham et. al (2017) concluded that rainfall variability is the major factor influencing the demography of E. Melanophloia.’ or ‘The demography of E. melanophloia is most strongly influenced by rainfall variability.’ (Fensham et. al 2017).

When using quotation marks, whether you use single or double quotation marks, be sure that you are consistent. Note that I used single quotes here to distinguish my wording and double quotes for the direct quotation.

Why do we cite?

The main reasons we cite is to clearly distinguish our work from others and so the source of information can be located and verified. Citation also honours the work or intellectual property of the author. Researchers most often cite other studies when developing their reasoning for their own studies, when comparing their work with other researchers and to indicate when authors reach similar or dissimilar conclusions. In this way, the citation process maintains and further develops the scientific discourse and shows how authors place their work within the published scientific literature.

What information can be cited?

It is a good idea to only cite information that has been published or made publicly available. Be cautious about referencing information from documents that are not publicly available or have not been peer-reviewed.

Unpublished research is referred to as grey literature. Grey literature is defined as “…research that has not been published commercially and is therefore not necessarily searchable via the standard databases and search engines. Much grey literature is of high quality and can be an excellent source of up to date research in certain subject areas. Examples of grey literature: government reports, conference proceedings, theses / dissertations, research reports, maps, policy statements, clinical trials, technical standards, interviews and newsletters” (UNSW Library).

If it is necessary to cite unpublished information, the integrity of this information may be questioned if no other sources are provided. Be cautious about generating conclusions or inferences solely on the basis of unpublished information or uncitable 'facts'.

How to cite different types of publications

Most Australian university library websites will list guides to different referencing styles; for example, Queensland University and Victoria University have in-depth guides on different referencing styles and how to cite and reference different types of publications. Also refer to Colin Neville’s book, The Complete Guide to Referencing and Avoiding Plagiarism (2016) for an in-depth guide on how to reference and cite a wide range of published material including books, papers, newspaper articles and audio-visual material.

What doesn’t need to be cited     

Information that is commonly known to be true is not cited. Common knowledge is information that is widely accepted as being true and does not need to be cited. However, what is common knowledge depends upon the knowledge of the audience: what is commonly known to some groups of people would not necessarily be commonly known by another group of people.

As readers, we trust that the author’s knowledge of what is commonly known, is true. For example, the quote from Fensham (see above) included an unreferenced statement that E. melanophloia is a dominant tree in a semi-arid savanna (Fensham et al. 2017, p. 780). I assume that this statement is common knowledge as it was uncited. Another example is that it is common knowledge to entomologists that (most) beetles have only one pair of flying wings, with the second pair of wings evolved to form protective covers to the flying wings. This fact would not need to be cited in entomology publications, not only because it is commonly known, but because it is easy enough to find out.

Avoid inadvertent plagiarism

Remember that unreferenced statements might be considered plagiarism. If you continually make unreferenced statements, you can mislead the reader into thinking that your un-cited information is either common knowledge or that you generated this information yourself.

Publications cited
- Magellan, K. (2016) Amphibious adaptations in a newly recognized amphibious fish: Terrestrial locomotion and the influences of body size and temperature. Austral Ecology 41,452-460
- Fensham, R. J., Freeman, M. E., Laffineur, B., Macdermott, H., Prior, L. D., & Werner, P. A. (2017). Variable rainfall has a greater effect than fire on the demography of the dominant tree in a semi-arid Eucalyptus savanna. Austral Ecology, 42(7), 772– 782
- Gonzales T. T., Katoh M. & Ishimatsu A. (2006) Air breathing of aquatic burrow-dwelling eel goby, Odontamblyopus lacepedii (Gobiidae: Amblyopinae). J. Exp. Biol. 209, 1085–92.

© Dr Marina Hurley 2026 www.writingclearscience.com.au

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What goes into a document’s Appendix?


In a nutshell: Any additional information or data that supports the main document or report.

Appendices (singular; appendix), supporting information and supplementary data are terms that describe information presented as an attachment to a report, paper, article or thesis. The term used depends on the type of communication being prepared; appendices are usually used in theses and reports, whereas supplementary data or supporting information are often terms used by scientific journals.

Scientific journals place constraints on the length of published papers and actively encourage the use of supporting information to keep papers short and concise. Supporting materials are also peer-reviewed and their inclusion should be scientifically relevant.

In general, supporting information is:

– Relevant to the main report and provides extra information that will expand the reader’s knowledge of the topic.

– Not strictly necessary or essential; the report should include all of the information required to address the research problem and still be understandable to the reader without referring to the supporting information.

– Too cumbersome for the main report.

Examples of supporting information include:

– Extra information about methods used in the research project; for example, details on reagents, specific conditions used, and detailed descriptions of measuring instruments.

– Large and complex datasets, with a summary or subset of the data included in the main report. Large spreadsheets using software such as Excel can often be inserted in supporting information.

– Detailed drawings, maps, diagrams or charts.

– Sample calculations or detailed mathematical derivations.

– Questionnaires or surveys.

– Raw data or analytical data (e.g. data produced from instruments), with a summary of the processed data included in the main report.

– Detailed text, such as transcripts of interviews and excerpts from surveys.

– Summaries of other reports that expand the reader’s knowledge of the topic.

For studies with large datasets, the use of a public data repository could be appropriate. Check the journal you are submitting to as they usually provide information on the types of data repositories that should be considered. Lists of data repositories are also available (see Further Reading).

Structure guidelines

Divide the information into appropriate sections, with each section on a separate page. Each section should have a title that clearly explains its content.

Label the sections; appendices are usually labelled Appendix 1, 2, 3 (or A, B, C) whereas as supporting information is often labelled according to its type; for example, Supplementary Table 1, Supporting Figure 1, Supplementary Video 1. As with figures and tables in the main report, supporting information is numbered according to the order it is mentioned in the text of the report.

The page numbering should be continued from the last page of text in the main report.

Always remember to check publisher’s requirements and editorial guidelines. Figures and tables should be carefully formatted as per editorial requirements, ensuring appropriate file formats are used. Also look at different formats presented in documents specific to your field.

Citation

Insert appendices at the end of the report, after the bibliography. Ensure all supporting information is appropriately cited in the report; it should be easy to find. Also ensure it is listed in the table of contents (if used).

Critically evaluate your supporting information; Is it relevant and does it expand the reader’s understanding?

Further reading

Organising your social sciences research paper: Appendices

Data repositories

- Registry of Research Data Repositories

- List of data repositories for open data

Example Instructions to Authors

- Science: Format and style of supplementary materials

- The Veterinary Journal Guide for Authors: Supplementary material

Plos One: Supporting Information 

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How to maintain high-quality images for publication


How to ensure your photos, graphs and illustrations are of suitable quality for publication

Digital images are stored in different formats, depending upon the software. Common examples include TIFF, JPEG and EPS. Before preparing figures for the web or for print, it is vital to ensure that the appropriate resolution is used.

Resolution describes the number of pixels within an image and image quality increases with resolution. A pixel is the smallest unit of digital information that forms an image. Resolution can be expressed as the number of pixels per dimension (e.g. 1200 pixels wide by 750 pixels high) or as the number of pixels within a specified area (pixels per inch or ppi). An image that has a resolution of 300ppi and is 4 x 2.5 inches in size, will be 1200 pixels wide (4 x 300) = and 750 pixels high (2.5 x 300). In general, the more pixels you have per unit area, the more detailed the image will be and the larger the file size. Some software (such as Photoshop) allows you to change the units to pixels per centimetre; however, the publishing standard is usually ppi.

The resolution of an image for viewing on a monitor is described in ppi, whereas the term dots per inch (dpi)describes the resolution of a printed image, as printers print dots and not pixels. The terms are used interchangeably but for most purposes, ppi and dpi are essentially the same thing to describe resolution. To view an image on the accepted resolution is 72ppi as most LCD monitors display 67-130ppi. When submitting figures for publication, 300 ppi is the generally accepted resolution for print images.

    High quality (300ppi)                                                                      Low quality (50ppi)

If your image needs to be 300ppi, then you need to consider the size of your image in the final printed form and the number of pixels in your total image. A photo that will be 4 x 2.5 inches when printed will need at least 1200 x 750 pixels to achieve the desired print-quality resolution of 300 ppi. If you have fewer pixels, then the quality of the image (i.e. the resolution) will be reduced. You can also quickly check whether the resolution is sufficient by zooming your image to 400% and if it is blurry (pixelated), then the image may not reproduce well when printed. For more information on image resolution, and another way to check if the resolution of your image is appropriate, see https://www.thecanvasprints.co.uk/image-resolution-for-printing.

When re-sizing an image, some software programmes automatically change the size of the image without changing the number of pixels. For example, if you re-size a 1200 x 750 pixel image from 4 x 2.5 inches to a 12 x 7.5 inches the number of pixels will remain the same but the resolution will drop from 300ppi to 100ppi . The larger image will look OK on the screen, but the image quality will be poor if it is printed. Whatever image size you require, ensure the final version is at the desired resolution.

Additional terminology

Colour space is the way colour information is stored in a file. Grayscale refers to black and white (and grey!) images which use a single colour channel. RGB is a commonly-used colour space that divides colours into 3 channels: Red, Green and Blue. RGB is used by computers and digital devices and is commonly used by publishers who want to make sure their documents are properly displayed on their reader’s devices. CMYK is a four channel colour space (cyan, magenta, yellow and black) commonly used during the printing process. An RGB image might need to be converted to CMYK if it will be printed. Some publishers will do the conversion themselves, so you need to be aware that the colour of RGB images may look different when converted to CMYK.

Re-sampling changes the number of pixels in an image. Re-sampling is different to re-sizing. Down-sampling removes pixels and creates a smaller image, whereas up-sampling adds pixels using algorithms. Because re-sampling adds or removes pixels, a loss of image quality could result. This could be particularly important if you are presenting images that are taken from a microscope; it is imperative that re-sampling does not change the specific features of the data within the micrograph. As a general rule, create your images at the highest resolution possible to avoid the need to re-sample. However, re-sampling may sometimes be necessary; for example, when converting a very high-resolution image to a small size (2 x 2 inches). Always keep original files and ensure that the re-sampling process only happens towards the end of the figure creation process, so that you can go back to the original image if needed.

Image compression: Some file types (e.g. JPG) compress the pixels in the image to reduce file size. Be aware that different compression methods can affect image quality. Pay attention to the publisher’s requirements for compression and whether your software compresses by default.

Raster vs vector images: Raster images use raster data that is stored as pixels, for example, digital photographs. Because raster images use pixels, the quality is highly dependent on resolution. Vector images use vector data comprised of lines and curves, for example, line graphs. Because vector images do not use pixels, they can be re-sized to a very large size without becoming pixelated and losing quality. If you are publishing images that are line graphs only, consider using vector format files such as EPS. However, if you are assembling a line graph into a larger figure that includes digital images, the entire figure will become rasterised at some point; meaning that your vector image will become a raster image and need high resolution.

Infographic Summary


Additional reading on this topic

Introduction to Digital Resolution.
Image resolution and print quality.
How do I make high quality figures for my scientific publication?.
The difference between image re-sizing and re-sampling.
Science: preparing your figures.

© Dr Liza O’Donnell and Dr Marina Hurley  2019 www.writingclearscience.com.au

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Work procrastination: important tasks that keep us from writing


There is a lot of angst with people who want to write, yet cannot seem to. This is commonly referred to as writer’s block. Often the cause of writer’s block is procrastination.

There are a lot of blogs about procrastination; lots of advice and many very humourous blogs and skits (remember when Bernard from Black Books (Series 1, Ep. 1) gladly paired his socks and welcomed in the Jehovah’s Witness to avoid having to do his tax?). We could procrastinate by reading about procrastination: It’s very easy to procrastinate by learning how not to procrastinate. It’s also easy to recognise most types of procrastination: playing computer games, snacking, walking the dog, doing the dishes, chatting to your work colleagues and generally allowing yourself to get distracted by anything colourful, shiny, noisy or interesting.

A less obvious type of procrastination is simply keeping busy, also known as busywork: “work that usually appears productive or of intrinsic value but actually only keeps one occupied”. What is even less obvious is what I call work-procrastination; this is when you are working on a task that is very closely related to, but is not actually, writing. For example, sorting computer files; doing that extra bit of background reading on a topic you are already familiar with; editing the reference list of your report; looking up the perfect definition of a concept; proofreading; re-reading; or spending 40 minutes rewriting and polishing a nearly-perfect paragraph when you haven’t yet considered what might be the major points in your first draft.

You tell yourself that working on these related tasks will ultimately help complete the task; you convince yourself that they are important and necessary and that they must be completed before you write. Because we know these related tasks still have to be completed at some point, we procrastinate by doing them instead of writing.

How to realise when you are work-procrastinating?

When you stop writing and allow yourself to be distracted by other important tasks.

How to avoid work-procrastination?

–        Block off time on your calendar where you are only writing.
–        If it’s a first draft, just write. Don't worry if you write messily, incoherently and incompletely. Just get your main ideas out first.
–        Don’t stop and worry if you are making sense – leave that for when you tackle the second draft.
–        Don’t stop and re-read and edit what you’ve just written – leave that for when you tackle the second draft.
–        Set up a zone of silence to reduce distractions. 

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Twelve common mistakes when writing an abstract


An abstract is typically the summary or overview of a scientific paper, thesis or report. The purpose of the abstract is to give your reader a complete summary of your entire project. As there is a never-ending supply of papers and reports to read, you only have two chances to engage your reader and to convince them to keep reading. The first is the title (and the keywords) and the second is the abstract.

A well-written abstract will maximise the chances of your document being read, understood and even enjoyed. If writing a research paper, a well-written abstract will maximise your publication success. Not only will reviewers appreciate a good abstract, it may be the only part of the paper they are sent when invited to review a paper.

This focus of this article is to highlight what is commonly wrong with abstracts. Please note: The relevancy of some issues raised here might depend upon your discipline or document type. For example, some academic journals do not require abstracts at all or only require a very brief project overview.


These common mistakes are not listed in any particular order and some overlap:

1. Not writing a summary

The abstract should be a complete, succinct summary of your entire project. Summarising is being able to identify and highlight key points using as few words as possible.

2. Not paraphrasing your own work

Paraphrasing is when you use your own words to convey meaning from another source, with the aim of improving clarity. Paraphrasing often includes summarising. One common mistake is to copy entire sentences from different parts of the paper into the abstract. This is not summarising or paraphrasing.

3. Not summarising your entire project

A common mistake is to only include certain parts of the project in the abstract. If your paper is structured into Introduction, Methods, Results and Discussion sections, then your abstract includes a summary of each section, often written as a complete paragraph or with headings. If the abstract lacks key information, for example the aim or the conclusions, the reader may not appreciate the strength of importance of your project and not be convinced to keep reading. Don’t assume your reader will search through your document for this information if they can’t find it in the abstract.

4. Using the abstract as a de facto Introduction or Discussion

After writing important introductory and conclusion explanations in the abstract, some authors then don’t include these details in the body of the document, fearing it will look repetitive. This can happen if the abstract is written before designing the rest of the document. Although drafting an abstract in the early stages of writing is a good idea, it is best to finalise your abstract when you have finished the rest of your document.

5. Including too much (or not enough) background

If the abstract is considered a de facto introduction, too much background may be included. Alternatively, a brief summary of the background might be omitted if the author assumes the audience is completely familiar with the project topic and the background. Never assume your reader knows your topic or project as thoroughly as you do; some of you readers might, but they will still need this information to appreciate what your document is about.

6. Including too many (or not enough) methods

A brief summary of the methods or procedure is important as they are a key component of any project. Given the potential complexity and diversity of a scientific study, it is easy to add too much detail about methods; an example is the unnecessary listing of all data collection instruments and their brand names. The following example from a research paper abstract is a concise summary of the methods. “Methods: We systematically reviewed the literature and meta-analyzed risk estimates from longitudinal studies reporting the association of coronary heart disease (CHD) or heart failure (HF) with risk of dementia.” Wolters F.J. et al. (2018)

7. Not explaining what your results mean

As your abstract should include a summary of all parts of your project, this includes a summary of the discussion or conclusion of your study. Some authors omit interpreting their results, expecting the reader to wait until they have read the entire document. They may not.

8. Including citations, abbreviations and detailed measurements

Standard convention is to avoid writing abbreviations, detailed measurements or citations in an abstract. In some cases, and in some disciplines, it may be difficult to avoid using abbreviations if they are used as terms, are not written in any other format, difficult to write in full or impractical to leave out.

9. Including information not presented in the paper

It may be tempting to include extra information that is not in the rest of the document but this is misleading. Stick to your key aim.

10. Not following the Instructions to Authors of your target journal

A journals’ Instructions to Authors are just that: instructions; they are not suggestions or simply good ideas, nor are they meant to replace a science style guide. Depending upon the extent of this omission, not following a journal’s Instructions to Authors can dramatically increase the likelihood your paper will instantly returned for further changes.

11. Not including keywords

Keywords of your study are essential to ensure that your paper is correctly indexed and so your document will be visible in different search engines. Some authors assume this step is not necessary, assuming that all terms will be visible. Keywords “help promote an article’s visibility within the publications iceberg”.

12. Not giving the conclusion

Sometimes authors leave out the conclusion or the summary of their findings as they expect the reader will then go on to read the entire paper to find the answer. However, if the reader cannot find the answers in your abstract, they may just skip your paper and go onto the next one on their list. Also, leaving out the conclusion goes against the tenet that an abstract should be a summary of the entire paper.


Remember:

  • Don't assume your readers know a little less that you do.
  • Don't assume all published papers have good abstracts.
  • Seek feedback before finalising your later drafts.


© Dr Marina Hurley 2025 www.writingclearscience.com.au

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